Chapter 10 Spirochaetota
| Code_bundle | Code_element | Code_function | Domain | Function | Element | Definition |
|---|---|---|---|---|---|---|
| B010301 | B0103 | B01 | Biosynthesis | Nucleic acid biosynthesis | UDP/UTP | (K13800,K13809,K09903) |
| B010401 | B0104 | B01 | Biosynthesis | Nucleic acid biosynthesis | CDP/CTP | (K00940,K18533) K01937 |
| B010501 | B0105 | B01 | Biosynthesis | Nucleic acid biosynthesis | ADP/ATP | K01939 K01756 (K00939,K18532,K18533,K00944) K00940 |
| B021201 | B0212 | B02 | Biosynthesis | Amino acid biosynthesis | Arginine | K00611 K01940 (K01755,K14681) |
| B021202 | B0212 | B02 | Biosynthesis | Amino acid biosynthesis | Arginine | K22478 K00145 K00821 K09065 K01438 K01940 K01755 |
| B021301 | B0213 | B02 | Biosynthesis | Amino acid biosynthesis | Proline | ((K00931 K00147),K12657) K00286 |
| B060201 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | (K01647,K05942) (K01681,K01682) (K00031,K00030) ((((K00164+K00658),K01616)+K00382),(K00174+K00175)) ((K01902+K01903),(K01899+K01900),K18118) ((K00234+K00235+K00236+(K00237,K25801)),(K00239+K00240+K00241),(K00244+K00245+K00246)) (K01676,K01679,(K01677+K01678)) (K00026,K00025,K00024,K00116) |
| B060202 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | ((((K00164+K00658),K01616)+K00382),K00174) ((K01902+K01903),(K01899+K01900),K18118) ((K00234+K00235+K00236+(K00237,K25801)),(K00239+K00240+K00241),(K00244+K00245+K00246)) (K01676,K01679,(K01677+K01678)) (K00026,K00025,K00024,K00116) |
| B060203 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | K01948 K00611 K01940 (K01755,K14681) K01476 |
| B060204 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | (K00815,K00838,K00832,K03334) K00457 K00451 K01800 (K01555,K16171) |
| B060205 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | K00241+(K00242,K18859,K18860)+K00239+K00240 |
| B060206 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | K00244+K00245+K00246+K00247 |
| B060207 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | (K00169+K00170+K00171+K00172) K01007 K01595 K00024 (K01677+K01678) (K00239+K00240) (K01902+K01903) (K15038,K15017) K14465 (K14467,K18861) K14534 K15016 K00626 |
| B060208 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | (K02160+K01961+K01962+K01963) K14468 K14469 K15052 K05606 (K01847,(K01848+K01849)) (K14471+K14472) (K00239+K00240+K00241) K01679 K08691 K14449 K14470 K09709 |
| B060209 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | (K00169+K00170+K00171+K00172) (K01959+K01960) K00024 (K01677+K01678) (K18209+K18210) (K01902+K01903) (K00174+K00175+K00176+K00177) |
| B060210 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | (K18029+K18030) K14974 K18028 K15357 K13995 K01799 |
| B060211 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | K00611 K01940 (K01755,K14681) |
| B060212 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | K22478 K00145 K00821 K09065 K01438 K01940 K01755 |
| B060213 | B0602 | B06 | Biosynthesis | Organic anion biosynthesis | Fumarate | 2.6.1.1,2.6.1.5,2.6.1.27,2.6.1.57 1.13.11.27 1.13.11.5 5.2.1.2 3.7.1.2 |
| D050101 | D0501 | D05 | Degradation | Amino acid degradation | Serine | 4.3.1.17,4.3.1.18 |
| D060401 | D0604 | D06 | Degradation | Nitrogen compound degradation | GlcNAc | 2.7.1.59 3.5.1.25 3.5.99.6 |
| D060402 | D0604 | D06 | Degradation | Nitrogen compound degradation | GlcNAc | 3.5.1.25 3.5.99.6 |
| D090701 | D0907 | D09 | Degradation | Antibiotic degradation | Tetracycline | K08151,K08168,K18214,K18218,K18220,K18221 |
genome D0308 domain phylum class order
1 EHA03298_bin.15 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
2 EHA03305_bin.41 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
3 EHA03306_bin.10 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
4 EHA04584_bin.1 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
5 EHA04588_bin.67 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
6 EHA03303_bin.3 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
7 EHA03303_bin.13 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
8 EHA03305_bin.265 1.00 d__Bacteria p__Bacillota c__Bacilli o__Staphylococcales
9 EHA03347_bin.69 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
10 EHA03305_bin.7 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
11 EHA03284_bin.37 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
12 EHA03294_bin.41 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
13 EHA03288_bin.14 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
14 EHA03306_bin.40 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
15 EHA03351_bin.61 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
16 EHA03291_bin.19 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
17 EHA04572_bin.27 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
18 EHA04588_bin.155 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
19 EHA03286_bin.19 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
20 EHA03343_bin.6 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
21 EHA03335_bin.54 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
22 EHA03288_bin.1 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
23 EHA03303_bin.18 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
24 EHA03331_bin.14 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
25 EHA04571_bin.1 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
26 EHA03282_bin.3 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
27 EHA03303_bin.19 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
28 EHA03292_bin.33 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
29 EHA03289_bin.1 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
30 EHA03305_bin.139 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
31 EHA03284_bin.21 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
32 EHA03335_bin.2 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
33 EHA03299_bin.29 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
34 EHA04587_bin.13 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
35 EHA04572_bin.12 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
36 EHA03281_bin.27 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
37 EHA04588_bin.163 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
38 EHA04588_bin.109 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
39 EHA03335_bin.59 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
40 EHA03331_bin.42 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
41 EHA03302_bin.23 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
42 EHA03294_bin.11 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
43 EHA04582_bin.20 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
44 EHA04588_bin.129 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
45 EHA03305_bin.54 1.00 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
46 EHA03305_bin.187 1.00 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
47 EHA04570_bin.11 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
48 EHA03329_bin.12 0.75 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
49 EHA03290_bin.8 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
50 EHA03282_bin.24 0.75 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
51 EHA03347_bin.46 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
52 EHA03305_bin.10 0.75 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
53 EHA04584_bin.27 0.75 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
54 EHA03288_bin.6 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
55 EHA04588_bin.27 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
56 EHA03305_bin.165 0.75 d__Bacteria p__Verrucomicrobiota c__Lentisphaeria o__Victivallales
57 EHA03299_bin.8 0.75 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
58 EHA03292_bin.24 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
59 EHA03335_bin.4 0.75 d__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales
60 EHA03347_bin.49 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
61 EHA03335_bin.23 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__UMGS1883
62 EHA03287_bin.10 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__UMGS1883
63 EHA03306_bin.65 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
64 EHA04587_bin.4 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
65 EHA04588_bin.9 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
66 EHA03304_bin.14 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__UMGS1883
67 EHA04569_bin.16 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
68 EHA03341_bin.13 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
69 EHA03306_bin.99 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
70 EHA04583_bin.16 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
71 EHA03300_bin.21 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
72 EHA03347_bin.26 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
73 EHA03288_bin.21 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
74 EHA03305_bin.48 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
75 EHA03347_bin.78 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
76 EHA03306_bin.194 0.75 d__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales
77 EHA03294_bin.21 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
78 EHA04570_bin.15 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
79 EHA04587_bin.16 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Christensenellales
80 EHA03290_bin.41 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
81 EHA03306_bin.93 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
82 EHA03335_bin.29 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Oscillospirales
83 EHA04588_bin.75 0.75 d__Bacteria p__Bacillota_A c__Clostridia o__Lachnospirales
family genus species completeness contamination length
1 f__Oscillospiraceae g__RUG626 s__ 98.68 0.09 2717563
2 f__Bacteroidaceae g__Bacteroides s__Bacteroides caccae 93.33 0.92 4211779
3 f__Bacteroidaceae g__Bacteroides s__ 85.48 0.30 3379113
4 f__Bacteroidaceae g__Phocaeicola_A s__Phocaeicola_A sp900765575 98.44 0.99 4116127
5 f__CAG-74 g__Ventricola s__ 95.10 1.64 2254008
6 f__Lachnospiraceae g__Choladousia s__ 97.25 1.25 4671245
7 f__CAG-74 g__UBA11524 s__ 97.95 0.43 3239667
8 f__Staphylococcaceae g__Staphylococcus s__Staphylococcus equorum 98.15 0.93 2867894
9 f__Lachnospiraceae g__Eisenbergiella s__ 86.47 0.42 2839523
10 f__Rikenellaceae g__Alistipes_A s__Alistipes_A pullistercoris 80.85 1.07 2007002
11 f__Bacteroidaceae g__Bacteroides s__Bacteroides xylanisolvens 50.02 1.84 3074582
12 f__Rikenellaceae g__Alistipes s__Alistipes onderdonkii 85.22 0.56 3111954
13 f__Tannerellaceae g__Parabacteroides s__Parabacteroides distasonis 99.92 1.04 4517903
14 f__Tannerellaceae g__Parabacteroides s__Parabacteroides merdae 95.00 1.15 3536678
15 f__Bacteroidaceae g__Bacteroides s__Bacteroides xylanisolvens 54.54 0.36 3343098
16 f__Bacteroidaceae g__Phocaeicola s__Phocaeicola vulgatus 75.41 7.84 3604540
17 f__Bacteroidaceae g__Phocaeicola s__Phocaeicola vulgatus 91.00 1.41 4625753
18 f__Bacteroidaceae g__Phocaeicola_A s__ 84.99 0.58 2866150
19 f__Lachnospiraceae g__Eisenbergiella s__ 92.06 0.05 2581303
20 f__Tannerellaceae g__Parabacteroides s__ 52.37 9.76 5007474
21 f__Bacteroidaceae g__Bacteroides s__Bacteroides intestinalis 84.40 0.96 4955849
22 f__Lachnospiraceae g__Eisenbergiella s__ 91.13 3.59 4717828
23 f__Bacteroidaceae g__Phocaeicola s__Phocaeicola dorei 100.00 0.02 5099128
24 f__Bacteroidaceae g__Bacteroides s__Bacteroides cellulosilyticus 71.05 0.68 4704445
25 f__Bacteroidaceae g__Bacteroides s__Bacteroides eggerthii 99.89 1.16 4889799
26 f__CAG-74 g__Ventricola s__ 89.78 0.07 2436197
27 f__Bacteroidaceae g__Bacteroides s__Bacteroides thetaiotaomicron 99.65 0.58 5784890
28 f__Rikenellaceae g__Alistipes s__Alistipes senegalensis 87.06 2.36 3508537
29 f__CAG-74 g__Ventricola s__ 81.23 0.26 2045707
30 f__Lachnospiraceae g__CAJMNU01 s__ 89.86 0.91 3464102
31 f__Lachnospiraceae g__Eisenbergiella s__ 98.68 0.00 2980924
32 f__Tannerellaceae g__Parabacteroides s__Parabacteroides distasonis 83.11 0.46 3502905
33 f__Lachnospiraceae g__Eisenbergiella s__ 97.51 0.05 2710143
34 f__Bacteroidaceae g__Phocaeicola s__Phocaeicola sartorii 99.88 0.79 5360617
35 f__Lachnospiraceae g__Eisenbergiella s__ 94.67 0.67 3209166
36 f__Bacteroidaceae g__Bacteroides s__Bacteroides cellulosilyticus 83.85 1.02 5526176
37 f__Bacteroidaceae g__Phocaeicola s__Phocaeicola vulgatus 76.67 4.85 3873955
38 f__Bacteroidaceae g__Phocaeicola s__ 83.28 0.04 2269172
39 f__Bacteroidaceae g__Bacteroides s__Bacteroides xylanisolvens 89.55 1.95 5681643
40 f__Bacteroidaceae g__Bacteroides s__Bacteroides xylanisolvens 87.77 1.56 4514808
41 f__Rikenellaceae g__Alistipes s__Alistipes senegalensis 91.07 1.61 3611824
42 f__Lachnospiraceae g__Eisenbergiella s__ 97.55 1.10 2772085
43 f__Bacteroidaceae g__Bacteroides s__Bacteroides intestinalis 98.74 3.02 5262979
44 f__Bacteroidaceae g__Mediterranea s__ 84.60 0.27 2458429
45 f__Bacteroidaceae g__Bacteroides s__Bacteroides nordii 86.46 2.91 4775769
46 f__Lachnospiraceae g__Acetatifactor s__ 83.86 5.94 2081955
47 f__Lachnospiraceae g__UBA11774 s__ 98.12 0.39 2485558
48 f__Tannerellaceae g__Parabacteroides s__Parabacteroides merdae 78.72 0.98 2799466
49 f__Lachnospiraceae g__COE1 s__ 100.00 0.20 3572382
50 f__Bacteroidaceae g__Phocaeicola s__Phocaeicola dorei 67.52 2.70 3232002
51 f__Borkfalkiaceae g__Gallimonas s__ 91.16 0.09 1738834
52 f__Bacteroidaceae g__Bacteroides s__Bacteroides cellulosilyticus 78.74 0.70 4821793
53 f__Bacteroidaceae g__Bacteroides s__ 51.88 6.75 3947610
54 f__Lachnospiraceae g__HGM12545 s__ 76.13 3.48 2267120
55 f__Oscillospiraceae g__UBA738 s__ 91.88 2.29 2503255
56 f__Victivallaceae g__Victivallis s__ 89.01 3.30 1970449
57 f__Bacteroidaceae g__Bacteroides s__Bacteroides uniformis 83.24 5.18 3484560
58 f__Lachnospiraceae g__UBA3402 s__ 85.93 0.60 2588937
59 f__Rikenellaceae g__Alistipes_A s__ 76.39 1.16 1912399
60 f__Borkfalkiaceae g__Gallimonas s__ 77.78 2.06 1482397
61 f__UMGS1883 g__JAJQCX01 s__ 96.29 0.03 2311623
62 f__UMGS1883 g__JAJQCX01 s__ 93.35 0.43 2228574
63 f__CAG-272 g__CAKSQF01 s__ 72.26 1.30 1885396
64 f__Oscillospiraceae g__Enterenecus s__ 99.25 1.00 5115488
65 f__Lachnospiraceae g__UBA3402 s__ 93.69 1.61 2069593
66 f__UMGS1883 g__JAJQCX01 s__ 93.11 0.60 2259580
67 f__Oscillospiraceae g__CAJOIG01 s__ 84.02 1.35 2301527
68 f__Ruminococcaceae g__Gemmiger s__ 99.94 1.60 2427709
69 f__Lachnospiraceae g__Acetatifactor s__ 61.29 3.11 2080558
70 f__Lachnospiraceae g__Choladousia s__ 86.84 2.01 3189852
71 f__Lachnospiraceae g__Eisenbergiella s__ 96.57 0.30 2451036
72 f__Oscillospiraceae g__RUG626 s__ 100.00 0.90 2823227
73 f__Lachnospiraceae g__Eisenbergiella s__Eisenbergiella porci 70.86 2.03 3844038
74 f__CAG-74 g__Ventricola s__ 72.98 2.77 1939234
75 f__Oscillospiraceae g__CAJOIG01 s__ 65.91 3.18 1927346
76 f__UBA1820 g__Merdimorpha s__Merdimorpha sp003150615 99.49 0.02 2080137
77 f__CAG-74 g__Ventricola s__ 73.33 3.89 1688509
78 f__Lachnospiraceae g__Blautia_A s__ 98.07 0.40 3924384
79 f__CAG-74 g__ s__ 82.41 5.34 2314477
80 f__Lachnospiraceae g__UBA3402 s__ 89.35 0.80 3103732
81 f__JAAYOS01 g__CALXFK01 s__ 95.12 0.45 2515794
82 f__JAAYOS01 g__CALXFK01 s__ 94.70 0.87 1968744
83 f__Lachnospiraceae g__UBA3402 s__ 89.05 3.42 2007340
[ reached 'max' / getOption("max.print") -- omitted 682 rows ]10.1 MCI
GIFTs_functions_community %>%
rowMeans() %>%
as_tibble(., rownames = "sample") %>%
left_join(sample_metadata, by = join_by(sample == sample)) %>%
# filter(time_point=="0_Wild") %>%
group_by(diet) %>%
summarise(MCI = mean(value), sd = sd(value))# A tibble: 3 × 3
diet MCI sd
<chr> <dbl> <dbl>
1 Post_grass 0.240 0.0130
2 Pre_grass 0.249 0.0152
3 Wild 0.254 0.0206MCI <- GIFTs_functions_community %>%
rowMeans() %>%
as_tibble(., rownames = "sample") %>%
left_join(sample_metadata, by = join_by(sample == sample))
# %>%
# filter(diet!="Post_grass")
shapiro.test(MCI$value)
Shapiro-Wilk normality test
data: MCI$value
W = 0.98397, p-value = 0.8693 Df Sum Sq Mean Sq F value Pr(>F)
diet 2 0.001317 0.0006583 2.39 0.107
Residuals 33 0.009090 0.0002755 
10.4 Wilcoxon comparison
10.4.1 Community elements differences:
Elements Pre_grass Wild Function Element Difference
1 D0702 2.176967e-01 4.215706e-01 Alcohol degradation_Ethanol Ethanol -0.2038739000
2 D0708 6.562387e-02 1.137517e-01 Alcohol degradation_Phytol Phytol -0.0481278300
3 D0705 2.174659e-01 2.932360e-01 Alcohol degradation_Propylene glycol Propylene glycol -0.0757701000
4 D0509 3.498560e-01 4.690221e-01 Amino acid degradation_Arginine Arginine -0.1191661000
5 D0505 2.884142e-01 3.728710e-01 Amino acid degradation_Valine Valine -0.0844568000
6 B0307 2.568247e-01 3.888024e-01 Amino acid derivative biosynthesis_Spermidine Spermidine -0.1319777000
7 D0903 1.047526e-03 2.363183e-03 Antibiotic degradation_Cephalosporin Cephalosporin -0.0013156570
8 D0904 3.904555e-05 1.422616e-03 Antibiotic degradation_Oxacillin Oxacillin -0.0013835705
9 B0902 9.761388e-06 3.556539e-04 Metallophore biosynthesis_Aerobactin Aerobactin -0.0003458925
10 D0608 3.360954e-04 1.404321e-02 Nitrogen compound degradation_Betaine Betaine -0.0137071121
11 D0306 2.292213e-01 3.300262e-01 Sugar degradation_D-Xylose D-Xylose -0.1008049000
12 D0806 2.616052e-05 9.531525e-04 Xenobiotic degradation_Anthranilate Anthranilate -0.0009269920
13 D0811 3.527381e-06 1.281851e-04 Xenobiotic degradation_Benzoyl-CoA Benzoyl-CoA -0.0001246577
14 D0808 1.952277e-06 7.113078e-05 Xenobiotic degradation_Cumate Cumate -0.0000691785
15 D0819 4.314553e-05 1.892106e-03 Xenobiotic degradation_Mercury Mercury -0.0018489605
group_color
1 Wild
2 Wild
3 Wild
4 Wild
5 Wild
6 Wild
7 Wild
8 Wild
9 Wild
10 Wild
11 Wild
12 Wild
13 Wild
14 Wild
15 Wild
